Training materials
Related resources: Associated Training Datasets
and Target audience: Students
and Contributors: Simon Gladman
-
e-learning
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
e-learning
Identification of somatic and germline variants from tumor and normal sample pairs
• beginnerGenetic variation Variant Analysis -
e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly covid19 -
e-learning
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
e-learning
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
e-learning
High Throughput Molecular Dynamics and Analysis
••• advancedComputational chemistry