Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Simon Gladman
and Contributors: Bérénice Batut
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e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
e-learning
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
e-learning
Reference Data with CVMFS
• beginnerGalaxy Server administration ansible git-gat -
e-learning
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
e-learning
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote
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