Training materials
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e-learning
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
e-learning
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
hands-on tutorial
Hands-on for 'Identification of the micro-organisms in a beer using Nanopore sequencing' tutorial
• beginnerMetagenomics metagenomics nanopore beer citizen science -
e-learning
Upload data to Galaxy
• beginnerIntroduction to Galaxy Analyses -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq