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PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy -
Recorded webinar, Slidedeck
Europe PMC API workshop: Part two
API Literature search Literature database search Europe PMC Annotations
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Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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e-learning
Bioinformatics for the terrified: An introduction to the science of bioinformatics
Bioinformatics Ontology and terminology Introduction Databases Metadata Controlled vocabularies
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
Metagenomics MGnify Sequence Analysis Microbiology
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e-learning
2024 highlights: A year of on-demand training
Bioinformatics Introduction
-
Recorded webinar
Exploring ChEMBL Data with the new ChEMBL Interface
Drug discovery
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Tutorial
MGnify quick tour
Metagenomics Sequence analysis MGnify Microbiology
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e-learning
Structural volume data
Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
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Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
Biomedical Literature Data links databases External links
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Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
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Recorded webinar
Life cell by cell: Introduction to Single Cell Expression Atlas
Gene expression
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Recorded webinar
European Nucleotide Archive: An introduction
Sequencing
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Recorded webinar
Ethics/ELSI considerations - From FAIR to fair data sharing
Data governance
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Recorded webinar
UniProtKB: Increasing our understanding of neurodegenerative disorders through data curation
Neurobiology Function analysis Data curation and archival
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Recorded webinar
A guide to the maintenance of life science data by biocurators
Data curation and archival
-
Recorded webinar
A guide to exploring drug-like compounds and their biological targets using ChEMBL
Chemical biology Drug discovery
-
Recorded webinar
Getting started with the Open Targets Platform GraphQL API
Drug discovery
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Recorded webinar
Retrieving biological data from EMBL-EBI resources using Dbfetch
-
Recorded webinar
Introduction to qualitative modelling with MaBoSS
Systems biology
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Recorded webinar
Methods for exploring newly-annotated species in Ensembl Rapid Release
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Recorded webinar
Logic modelling of signalling networks – CellNOpt and CARNIVAL
Systems biology
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Course materials
Managing a Bioinformatics Core Facility: CABANA Virtual Workshop Handbook
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Recorded webinar
Exploring genotype-phenotype data using the GWAS Catalog
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Recorded webinar
Annotate your proteins with the UniProt Functional Annotation system UniFire
Proteins Function analysis
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Recorded webinar
Submitting metagenomic data to ENA
Metagenomic sequencing Sequencing
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Webinar
Preprint discovery 101: Tips & tricks for authors and readers
Europe PMC, Preprints
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Recorded webinar
Programming skills in biocuration
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Webinar
Integrating publications into bioinformatics analysis
Europe PMC REST API Bioinformatic analysis
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Recorded webinar
Annotating genomes with non-coding RNAs using Rfam and Infernal
Genomics
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Workshops and courses
Introduction to RNA-seq and functional interpretation
24 - 28 February 2025
Online
RNA-Seq analysis Function analysis Gene expression profile RNA-Seq Transcriptome assembly Transcriptomics Gene transcripts -
Workshops and courses
AlphaFold Education Summit
14 - 16 January 2025
United Kingdom
Face-to-face
-
Workshops and courses
Metagenomics bioinformatics at MGnify
6 - 10 October 2025
United Kingdom
Face-to-face
-
Workshops and courses
Introduction to metabolomics analysis
20 - 23 May 2025
United Kingdom
Face-to-face
Metabolomics Mass spectrometry data Metabolic network modelling MetaboLights: Metabolomics repository and reference database Galaxy for metabolomics MS Imaging Metabolite identification -
Workshops and courses
An introduction to EMBL-EBI resources
15 January 2025 @ 09:00 - 17:00
Online
Introduction EMBL-EBI data services -
Workshops and courses
Cancer genomics and transcriptomics
12 - 16 May 2025
Online
Oncology Genomics Sequencing Next-generation sequencing SNV analysis CNV analysis CRISPR-Cas9 Long-read RNA-seq -
Workshops and courses
Workshop on Artificial Intelligence Competencies: training challenges and needs of research infrastructures and core facilities
25 - 27 February 2025
United Kingdom
Face-to-face
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FEBS: In Silico Systems Biology: Network Reconstruction, Analysis and Network-based Modelling
No date given
Face-to-face
HDRUK -
Using the Ensembl Genome Browser
No date given
Face-to-face
HDRUK -
Workshops and courses
Structural bioinformatics
27 - 31 October 2025
Online
-
Workshops and courses
Methods for infectious disease modelling using genomics
15 - 19 September 2025
United Kingdom
Face-to-face
-
Workshops and courses
Data science for life scientists
16 - 20 June 2025
United Kingdom
Face-to-face
Data science Python Data visualisation Statistics Machine learning -
Workshops and courses
Single-cell RNA-seq analysis with Python
17 - 21 February 2025
Online
-
Workshops and courses
Small molecule chemistry: from proteins to pathways
28 November 2024 @ 09:00 - 17:00
Online
Chemical biology Molecular interactions, pathways and networks Protein structure ChEMBL: Bioactive data for drug discovery PDBeChem Reactome pathways database chemical biology small molecules ligands -
EBI - Joint EBI-Wellcome Trust Proteomics Bioinformatics workshop
No date given
Face-to-face
HDRUK -
Workshops and courses
Calculating polygenic scores with the Polygenic Score Catalog Calculator
4 December 2024 @ 09:00 - 17:00
Online
GWAS study Genetics Polygenic Score Catalog DNA & RNA (dna-rna) polygenic score -
Workshops and courses
Managing a bioinformatics core facility
8 - 10 December 2025
United Kingdom
Face-to-face
Bioinformatics Budgeting Project management Team building Principal investigators Core facility services -
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing
17 - 21 November 2025
United Kingdom
Face-to-face
-
Workshops and courses
Microscopy data analysis: machine learning and the BioImage Archive
31 March - 4 April 2025
Online
Machine learning Bioimaging Image analysis Bioimage analysis Machine learning models Scientific computing Light microscopy Electron microscopy -
Workshops and courses
Proteomics bioinformatics
14 - 18 July 2025
United Kingdom
Face-to-face
-
Workshops and courses
Summer school in bioinformatics
16 - 20 June 2025
United Kingdom
Face-to-face
Protein Data Bank in Europe - Knowledge Base BioModels database BioImage Archive Introduction Data management Genome variation Structural bioinformatics Modelling cell signalling Bioimage analysis -
Workshops and courses
Data visualisation for biology
24 - 26 June 2025
United Kingdom
Face-to-face
Data visualisation Data exploration User experience Visual analytics -
Workshops and courses
UniProt
10 October - 11 December 2024
Online
UniProt: The Universal Protein Resource Proteins (proteins) -
Workshops and courses
Systems biology: from large datasets to biological insight
7 - 11 July 2025
United Kingdom
Face-to-face
Deep learning Network inference Logic modelling Multi-Omics Factor Analysis Data integration -
Workshops and courses
Uncovering protein function with UniProt
11 December 2024 @ 09:00 - 17:00
Online
UniProt: The Universal Protein Resource Proteins (proteins) -
Workshops and courses
Gene-environment interactions in human health and disease
17 - 21 March 2025
United Kingdom
Face-to-face
GWAS study Genotype and phenotype Computational biology European Genome-phenome Archive NHGRI-EBI GWAS Catalog Human ecosystems genes and environment interactions human phenotypes environmental readouts ethics -
Workshops and courses
Introduction to multi-omics data integration and visualisation
3 - 7 March 2025
United Kingdom
Face-to-face
Activity log
