Training materials
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e-learning
Decontamination of a genome assembly
• beginnerSequence assembly Assembly -
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• beginnerSequence assembly Assembly -
e-learning
ERGA post-assembly QC
• beginnerSequence assembly Assembly QC animals assembly genome plants -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore plants polishing -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
e-learning
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly covid19 -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio
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