Training materials
Difficulty level: Beginner
and Scientific topics: Comparative transcriptomics
and Related resources: Associated Workflows
-
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
e-learning
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
RNA-RNA interactome data analysis
• beginnerTranscriptomics -
e-learning
Network analysis with Heinz
• beginnerTranscriptomics metatranscriptomics network analysis -
e-learning
De novo transcriptome reconstruction with RNA-Seq
• beginnerTranscriptomics -
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics miRNA plants stress tolerance -
e-learning
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics