Training materials
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e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
e-learning
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
e-learning
Screening assembled genomes for contamination using NCBI FCS
• beginnerSequence analysis -
e-learning
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
slides
Friends Don't Let Friends Make Bad Graphs
• beginnerVisualisation -
e-learning
FAIR Galaxy Training Material
• beginnerFAIR Data, Workflows, and Research fair gtn training -
e-learning
FAIR data management solutions
• beginnerFAIR Data, Workflows, and Research data stewardship dmp fair -
e-learning
RO-Crate in Python
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate