Training materials
Related resources: Associated Training Datasets
and Target audience: Students
and Contributors: Yvan Le Bras
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e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
e-learning
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
e-learning
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Pangeo Notebook in Galaxy - Introduction to Xarray
• beginnerClimate interactive-tools jupyter-notebook pangeo -
e-learning
Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
• beginnerClimate pangeo -
e-learning
Visualize Climate data with Panoply netCDF viewer
• beginnerClimate interactive-tools -
e-learning
RAD-Seq de-novo data analysis
• beginnerEcology EBV dataset EBV workflow Genetic composition EBV class RAD-seq Species populations EBV class -
e-learning
Biodiversity data exploration
• beginnerEcology data quality taxonomic data -
e-learning
Metabarcoding/eDNA through Obitools
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding eDNA -
e-learning
Compute and analyze biodiversity metrics with PAMPA toolsuite
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Species population EBV class modeling
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