e-learning

Pangeo Notebook in Galaxy - Introduction to Xarray

Abstract

In this tutorial, we will learn about Xarray, one of the most used Python library from the Pangeo ecosystem.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • What is Pangeo notebook?
  • How to start Pangeo Notebook in Galaxy?
  • What are the main software components of the Pangeo ecosystem?
  • What is Xarray?
  • How to manipulate Xarrays?
  • How to print metadata information?
  • How to make a selection?
  • How to visualize?
  • How to filter?
  • How to make reduction operations (mean, max, min)?
  • How to resample my data?
  • Where to go next?

Learning Objectives

  • Learn to get metadata information using Xarray Galaxy Tools
  • Learn to select data
  • Learn to visualize data
  • Learn to filter, make reduction operations (mean, max, min)
  • Learn to resample my data
  • Learn to cite and contribute to Pangeo

Licence: Creative Commons Attribution 4.0 International

Keywords: Climate, interactive-tools, jupyter-notebook, pangeo

Target audience: Students

Resource type: e-learning

Version: 10

Status: Active

Prerequisites:

  • Advanced Python
  • Data Carpentry Geospatial Workshop
  • Introduction to Galaxy Analyses
  • Introduction to Python
  • Plotting in Python

Learning objectives:

  • Learn to get metadata information using Xarray Galaxy Tools
  • Learn to select data
  • Learn to visualize data
  • Learn to filter, make reduction operations (mean, max, min)
  • Learn to resample my data
  • Learn to cite and contribute to Pangeo

Date modified: 2024-06-14

Date published: 2022-02-18

Authors: Anne Fouilloux

Contributors: Anne Fouilloux


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