Training materials
Authors: Mehmet Tekman
and Scientific topics: Comparative transcriptomics
and Contributors: Saskia Hiltemann
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e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
e-learning
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics -
e-learning
Understanding Barcodes
• beginnerTranscriptomics Single Cell -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell