Training materials
Contributors: Saskia Hiltemann
and Licence: Creative Commons Attribution 4.0 International
and Authors: Bazante Sanders
12 materials found
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e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy nanopore -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
e-learning
Python - Files & CSV
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Introductory Graduation
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
e-learning
Python - Functions
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Math
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook
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