Chip-seq: Pattern Analysis tutorial

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The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR.

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France

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Chip-seq: Pattern Analysis tutorial

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Goal
The aim is to :

Get familiar with motif analysis of ChIP-seq data.
Learn de novo motif discovery methods.

In practice :

Motif discovery with peak-motifs
Differential analysis
Random controls

Keywords: Chip-seq, NGS, Pattern recognition

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