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Improve Shiny and RStudio integration within Galaxy using Galaxy Interactive Environment
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Variants: alignment and pre-treatment; GATK
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Getting started with Bioschemas
• beginnerBioschemas Standards -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
Chip-seq: Pattern Analysis tutorial
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Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing -
IFB Shiny training
•• intermediateR-programming Reproducible Science -
Webinar, Slides, Video
WheatIS DataDiscovery webinar
• beginnerData management wheat information system data discovery -
Variant Filtering
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Sequencing 6000 chloroplast genomes : the PhyloAlps project
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Prototyping the new PSICQUIC 2.0
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RGP finder: prediction of Genomic Islands
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Chip-seq: Functional Annotation tutorial
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MG-RAST — experiences from processing a quarter million metagenomic data sets
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bio.tools & EDAM drop-in hackathon & discussions
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200 billion sequences and counting: analysis, discovery and exploration of datasets with EBI Metagenomics
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Multiple Comparative Metagenomics using Multiset k-mer Counting
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From Samples to Data : Assuring Downstream Analysis with Upstream Planning
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Exploiting collisions between DNA molecules to characterize the genomic structures of complex communities
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NGS data exploration with the MicroScope Platform
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Gut metagenomics in cardiometabolic diseases
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Connecting Galaxy to a compute cluster
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New perspectives on nitrite-oxidizing bacteria - linking genomes to physiology
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ETBII 2023
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Welcome message
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Holistic metagenomics in marine communities
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Assessing microbial biogeography by using a metagenomic approach
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Slides
FAIR data - Module 1 (research data)
• beginnermetadata Data Life Cycle Reproducibility Data management plan -
Slides
FAIR data - Module 2 (data life cycle)
• beginnerData management Biology Bioinformatics Data handling Data preserving Data storage -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse
Activity log