Netherlands
Showing 30 materials out of 67
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
Tutorial
#metawinterschool contribution by BiGCaT
• beginnerMetabolomics Identifiers ELIXIR RIR, BridgeDb -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
Genetic variation Genomics ELIXIR RIR, BridgeDb
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Programming in the Life Sciences
• beginnerDrug discovery Pharmacology SPARQL Wikidata -
course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice
Data management Data curation and archival data management data stewardship eLearning EeLP
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course materials, Training materials, Documentation
ELIXIR eLearning definitions
eLearning training EeLP
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A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization -
Slides, Training materials
FAIR Data Stewardship - Data sharing, archiving and publishing
• beginnerData Life Cycle FAIR data management data stewardship data repositories data sharing data publication -
Training materials
Essential Steps of the FAIRification Process
•• intermediateFAIR data stewardship metadata linked data -
Slides, PDF
Helis Academy - Data Management Plans, why and how?
Data management Data managment plan Data Life Cycle
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Introduction to FAIR data stewardship
Data management FAIR
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PDF
An introduction to the role of experimental data in Intellectual Property
patents
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Slides
Helis Academy - Data Sharing, publishing and archiving
data sharing Data publishing data archiving data repositories data management
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Slides
Helis Academy - Persistent identifiers and their use cases
Referencing data and code Findability of data and code Identifying data and code data management
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Slides
FAIRification & Data modelling
FAIR linked data ontologies metadata
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course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers -
e-learning
Online course 'Learn to write your Data Management Plan'
• beginnerData management plan data management -
Slides
Helis Academy - FAIRify your data
linked data Wikidata data management
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Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
Biomodelling
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Tutorial
Rare Disease Pathway and Network Analysis
• beginnerPathway analysis Biological networks Network analysis Pathways -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing -
Tutorial
Use Scholia and Wikidata to find scientific literature
• beginnerLiterature -
Tutorial
SPARQLing Biology: a beginners course
• beginnerBiology Query and retrieval Sparql queries Sparql syntax -
Tutorial
Biological network data tutorial
• beginnerBiological networks Network Visualization -
Tutorial
Multi-omics data visualization with PathVisio
biological pathways Pathways Pathway analysis
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BridgeDb-Matlab Usage Instructions
ELIXIR RIR, BridgeDb
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Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN COSMIC
• beginnerFAIR data Data management Data analysis Data handling Data collection Data management planning Data preserving Data processing Data reuse Data sharing -
Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Introduction Landscape Wrap up
• beginnerData management FAIR data Data analysis Data handling Data management planning
Showing 3 events (also found 241 past events)
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Workshops and courses
Constraint-based modeling: Introduction and Advanced topics (BioSB course)
10 - 14 February 2025
Wageningen, Wageningen
Face-to-face
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Workshops and courses
Machine Learning for bioinformatics and system biology (2025) – (BioSB Fundamental course)
20 - 24 January 2025
Amsterdam UMC, Amsterdam UMC
Face-to-face
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Workshops and courses
Integrated Modeling and Optimization (2024) – (BioSB Fundamental course)
9 - 13 December 2024
Wageningen, Wageningen
Face-to-face
Showing 4 content providers
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DTLS - Dutch Techcentre For Life Sciences
DTL focuses on the great potential of high-end technologies in pioneering life science research, and on the skills and solutions to professionally use computers to deal with the ever-growing data streams in research.
41 training materials3 events (210 past events)DTLS - Dutch Techcentre For Life Sciences http://www.dtls.nl https://861596.fd6au1zn.asia/content_providers/dtls-dutch-techcentre-for-life-sciences DTL focuses on the great potential of high-end technologies in pioneering life science research, and on the skills and solutions to professionally use computers to deal with the ever-growing data streams in research. /system/content_providers/images/000/000/003/original/logo.png?1469458221 -
Department of Bioinformatics - BiGCaT, Maastricht University
The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate...
8 training materials0 events (1 past event)Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://861596.fd6au1zn.asia/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508 -
WikiPathways
WikiPathways is a database of biological pathways maintained by and for the scientific community.
1 training materialWikiPathways https://www.wikipathways.org https://861596.fd6au1zn.asia/content_providers/wikipathways WikiPathways is a database of biological pathways maintained by and for the scientific community. /system/content_providers/images/000/000/660/original/wikipathways-logo-horizontal.svg?1668072305 -
VHP4Safety
Material from the Dutch VHP4Safety project.
4 training materialsVHP4Safety https://vhp4safety.nl/ https://861596.fd6au1zn.asia/content_providers/vhp4safety Material from the Dutch VHP4Safety project. /system/content_providers/images/000/000/688/original/6XmjhQ2C_400x400.jpg?1696237918
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