Training materials
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Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• beginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data curation and archival Standardisation and normalisation -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
Biomodelling
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Infectious Disease Genomic Epidemiology 2018 Module 7-Data Visualization
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Infectious Disease Genomic Epidemiology 2018 Module 6-Emerging Pathogen Detection and Identification Using Metagenomics Samples
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Infectious Disease Genomic Epidemiology 2018 Module 5-Phylogeographic Analysis
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Infectious Disease Genomic Epidemiology 2018 Module 4-Antimicrobial Resistance Genes
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Infectious Disease Genomic Epidemiology 2018 Module 3-Pathogen Genomic Analysis 2
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Infectious Disease Genomic Epidemiology 2018 Module 2-Pathogen Genomic Analysis 1