Training materials
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stjude/learngenomics.dev
Genomics Sequencing Variant pattern analysis General Next generation sequencing Variant analysis
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digo4/Clinical-Genomics
Genomics Sequencing Variant pattern analysis Next generation sequencing Variant analysis
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pachterlab/BI-BE-CS-183-2023
Genomics Sequencing RNA-Seq Single-cell sequencing Transcriptomics Statistics and probability General Next generation sequencing RNA-seq Statistics
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fhdsl/Choosing_Genomics_Tools
ChIP-seq Epigenetics Genome annotation Genomics Sequencing RNA-Seq Single-cell sequencing Transcriptomics Variant pattern analysis ATAC-seq Next generation sequencing RNA-seq Spatial transcriptomics Variant analysis
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Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• beginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
Applied-Genomics-UTD/docs
ChIP-seq Epigenetics Genomics RNA-Seq Galaxy Snakemake Reproducibility Unix/Linux ATAC-seq RNA-seq
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stephenturner/workshops
Data visualisation R markdown Genomics RNA-Seq Statistics and probability General Data visualization R Rmarkdown RNA-seq Data science Statistics
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rapidspeciation/biodiversity_genomics_course
Genomics Sequencing Variant pattern analysis Next generation sequencing Variant analysis
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nt246/lcwgs-guide-tutorial
Genomics Sequencing Variant pattern analysis Next generation sequencing Variant analysis
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e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy