Training materials
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theislab/single-cell-best-practices
Single-cell sequencing Transcriptomics Python
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theislab/single-cell-tutorial
RNA-Seq Single-cell sequencing Transcriptomics Python RNA-seq
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Recorded webinar
Accessing single cell transcriptome data with the Human Cell Atlas Data Portal
Transcriptomics RNA-Seq Human biology
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Recorded webinar
Single-cell and spatial omics technologies in plant science
Omics Epigenomics Transcriptomics
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
Transcriptomics transcriptomics, single-cell, 10x, paper-replication, interactive-tools
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e-learning
RNA-RNA interactome data analysis
• beginnerTranscriptomics