Training materials
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hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Presentation
Preserve, publish and share your data
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e-learning
Data Management and Writing a Data Management Plan
• beginnerData management -
Scop3P
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Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming