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Scientific topics: Communicable disease

and Keywords: microgalaxy

and Related resources: Associated Training Datasets

5 materials found

e-learning

Identification of AMR genes in an assembled bacterial genome

• beginner
Whole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health
e-learning

Antibiotic resistance detection

• beginner
Metagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial resistance Microbiome amr assembly microgalaxy nanopore plasmids
e-learning

M. tuberculosis Variant Analysis

•• intermediate
Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis
e-learning

Tree thinking for tuberculosis evolution and epidemiology

• beginner
Evolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote
e-learning

Identifying tuberculosis transmission links: from SNPs to transmission clusters

•• intermediate
Evolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote