Training materials
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e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
e-learning
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
e-learning
Mapping and molecular identification of phenotype-causing mutations
• beginnerGenetic variation Variant Analysis -
e-learning
Identification of somatic and germline variants from tumor and normal sample pairs
• beginnerGenetic variation Variant Analysis -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
e-learning
Tree thinking for tuberculosis evolution and epidemiology
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote -
e-learning
Automating Galaxy workflows using the command line
• beginnerUsing Galaxy and Managing your Data covid19 variant-analysis workflows