Training materials
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e-learning
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
e-learning
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication