Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Helena Rasche
and Related resources: Jupyter Notebook (with Solutions)
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e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Introduction to sequencing with Python (part one)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
RO-Crate in Python
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
e-learning
Best practices for workflows in GitHub repositories
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
e-learning
Python - Coding Style
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Virtual Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Conda Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science conda jupyter-notebook -
e-learning
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Multiprocessing
••• advancedSoftware engineering Foundations of Data Science jupyter-notebook