Materials - TeSS (Training eSupport System)

Training materials

Register training material

Keywords: Assembly

and Licence: Creative Commons Attribution 4.0 International

and Contributors: Björn Grüning

15 materials found

e-learning

Decontamination of a genome assembly

• beginner
Sequence assembly Assembly
e-learning

Assembly of the mitochondrial genome from PacBio HiFi reads

• beginner
Sequence assembly Assembly
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Assembly QC animals assembly genome plants
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

Chloroplast genome assembly

• beginner
Sequence assembly Assembly jbrowse1 nanopore plants
e-learning

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

•• intermediate
Sequence assembly Assembly covid19
e-learning

Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

•• intermediate
Sequence assembly Assembly VGP eukaryote pacbio
e-learning

Making sense of a newly assembled genome

• beginner
Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
e-learning

Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

•• intermediate
Sequence assembly Assembly VGP eukaryote pacbio
e-learning

Unicycler Assembly

• beginner
Sequence assembly Genomics Microbiology Assembly microgalaxy prokaryote

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