Training materials
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e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Galaxy Admin Training
••• advancedTeaching and Hosting Galaxy training -
e-learning
Training Infrastructure as a Service
• beginnerTeaching and Hosting Galaxy training cyoa -
e-learning
Organizing a workshop
• beginnerTeaching and Hosting Galaxy training -
e-learning
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy jupyter-notebook -
e-learning
Data source integration
• beginnerSoftware engineering Development in Galaxy -
e-learning
ToolFactory: Generating Tools From Simple Scripts
• beginnerSoftware engineering Development in Galaxy -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy nanopore -
e-learning
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy