Training materials
Authors: Wendi Bacon
and Related resources: Associated Workflows
and Licence: Creative Commons Attribution 4.0 International
11 materials found
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e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• beginnerSingle Cell data management -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication
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