TeSS (Training eSupport System)

Training materials

Authors: Bérénice Batut

and Tools: FastQC

and Content provider: GTN

15 materials found

e-learning

Quality and contamination control in bacterial isolate using Illumina MiSeq Data

• beginner
Sequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
e-learning

Identification of the micro-organisms in a beer using Nanopore sequencing

• beginner
Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Metatranscriptomics analysis using microbiome RNA-seq data

• beginner
Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
e-learning

Metatranscriptomics analysis using microbiome RNA-seq data (short)

• beginner
Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
e-learning

Assembly of metagenomic sequencing data

• beginner
Sequence assembly Metagenomics Assembly assembly metagenomics microgalaxy
e-learning

Exome sequencing data analysis for diagnosing a genetic disease

• beginner
Genetic variation Variant Analysis
e-learning

Formation of the Super-Structures on the Inactive X

• beginner
Epigenomics ChIP-seq Epigenetics
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy

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Training materials

Quality and contamination control in bacterial isolate using Illumina MiSeq Data

Identification of the micro-organisms in a beer using Nanopore sequencing

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

Metatranscriptomics analysis using microbiome RNA-seq data

Metatranscriptomics analysis using microbiome RNA-seq data (short)

Assembly of metagenomic sequencing data

Exome sequencing data analysis for diagnosing a genetic disease

Formation of the Super-Structures on the Inactive X

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data