Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Wendi Bacon
and Contributors: Björn Grüning
12 materials found
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slides
Single-cell Formats and Resources
• beginnerSingle Cell -
e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics
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