Training materials
Difficulty level: Beginner
and Scientific topics: Comparative transcriptomics
and Authors: Pavankumar Videm
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slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
e-learning
RNA-RNA interactome data analysis
• beginnerTranscriptomics -
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics miRNA plants stress tolerance -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
e-learning
Small Non-coding RNA Clustering using BlockClust
• beginnerTranscriptomics -
e-learning
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq