Training materials
Licence: Creative Commons Attribution 4.0 International
and Target audience: Students
and Authors: Mehmet Tekman
17 materials found
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e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• beginnerSingle Cell data management -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
Transcriptomics transcriptomics, single-cell, 10x, paper-replication, interactive-tools
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e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell
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