Training materials, Poster

Structuring of Data and Metadata in Bioimaging: Concepts and technical Solutions in the Context of Linked Data

Provides an overview of contexts, frameworks, and models from the world of bioimage data as well as metadata. Visualizes the techniques for structuring this data as Linked Data. (Walkthrough Video: https://doi.org/10.5281/zenodo.7018928 )

Content:

Types of metadata
Data formats
Data Models Microscopy Data
Tools to edit/gather metadata
ISA Framework
FDO Framework
Ontology
RDF
JSON-LD
SPARQL
Knowledge Graph
Linked Data
Smart Data
...

DOI: 10.5281/zenodo.6821815

Licence: Creative Commons Attribution 4.0 International

Contact: https://www.i3dbio.de

Keywords: Metadata, linked data, Semantic Web technologies, Microscopy data, OME data model, RDF, ontology, FDO, ISA, I3D:bio

Resource type: Training materials, Poster

Status: Active

Learning objectives:

Overview and guided walk-through around the complexity of bioimaging metadata and relevant technologies for Linked Data

Authors: Susanne Kunis, Julia Dohle

Scientific topics: Bioimaging, Data management


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