slides

Refining Genome Annotations with Apollo

Abstract

Genome annotation

Questions this will address

  • How to visualize your genome after automated annotations have been performed?
  • How to manually annotate genome after automated annotations have been performed?
  • How to evaluate and visualize annotated genomic features?
  • How do I collaborate when doing genome annotation?

Learning Objectives

  • Load a genome into Galaxy
  • View annotations in JBrowse
  • Learn how to load JBrowse data into Apollo
  • Learn how to manually refine genome annotations within Apollo
  • Export refined genome annotations

Licence: Creative Commons Attribution 4.0 International

Keywords: Genome Annotation, prokaryote

Target audience: Students

Resource type: slides

Version: 9

Status: Active

Prerequisites:

Introduction to Galaxy Analyses

Learning objectives:

  • Load a genome into Galaxy
  • View annotations in JBrowse
  • Learn how to load JBrowse data into Apollo
  • Learn how to manually refine genome annotations within Apollo
  • Export refined genome annotations

Date modified: 2024-10-15

Date published: 2021-06-04

Authors: Anthony Bretaudeau, Helena Rasche, Mateo Boudet, Nathan Dunn

Contributors: Anthony Bretaudeau, Erasmus+ Programme, Helena Rasche, Mateo Boudet, Nathan Dunn


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