slides

Connecting Galaxy to a compute cluster

Abstract

Galaxy Job Configuration

Questions this will address

  • How to connect Galaxy to a compute cluster?
  • How can I configure job dependent resources, like cores, memory for my DRM?

Learning Objectives

  • Understand all components of the Galaxy job running stack
  • Understand how the job conf controls Galaxy's jobs subsystem
  • Know how to map tools to job destinations
  • The various ways in which tools can be mapped to destinations, both statically and dynamically

Licence: Creative Commons Attribution 4.0 International

Keywords: Galaxy Server administration, features

Target audience: Galaxy Administrators

Resource type: slides

Version: 19

Status: Active

Learning objectives:

  • Understand all components of the Galaxy job running stack
  • Understand how the job conf controls Galaxy's jobs subsystem
  • Know how to map tools to job destinations
  • The various ways in which tools can be mapped to destinations, both statically and dynamically

Date modified: 2023-04-21

Date published: 2018-01-07

Authors: Björn Grüning, Helena Rasche, Nate Coraor, Nicola Soranzo

Contributors: Björn Grüning, Helena Rasche, Nate Coraor, Nicola Soranzo


Activity log