e-learning

Regional GAM

Abstract

This tutorial will show you how to study species abundance through the computation of a flight curve, abundance index, and trends. It will explain you how to use different regionalGAM tools on Galaxy allowing you to deal with datasets containing abundance information for various species per site and per date through a couple of years.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • What are abundance and trends of a butterfly species?

Learning Objectives

  • Obtain and filter/manipulate occurrence data
  • Compute and visualize phenology of a species through the years
  • Compute temporal abundance trends

Licence: Creative Commons Attribution 4.0 International

Keywords: EBV dataset, EBV workflow, Ecology, Species populations EBV class, Species traits EBV class

Target audience: Students

Resource type: e-learning

Version: 17

Status: Active

Prerequisites:

Introduction to Galaxy Analyses

Learning objectives:

  • Obtain and filter/manipulate occurrence data
  • Compute and visualize phenology of a species through the years
  • Compute temporal abundance trends

Date modified: 2024-06-27

Date published: 2019-07-04

Authors: Bérénice Batut, Clara Urfer, Elisa Michon, Simon Benateau, Yvan Le Bras

Contributors: Bérénice Batut, Clara Urfer, Elisa Michon, Simon Benateau, Yvan Le Bras

Scientific topics: Ecology


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