e-learning
Proteogenomics 3: Novel peptide analysis
Abstract
The third and the last workflow in the proteogenomics tutorial is to identifying the "Novel peptides" using BlastP and to localize the peptides to its genomic coordinates. Inputs from both workflow 1 and 2 will be used in this workflow.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to verify the spectra of novel proteoforms?
- How to assign genomic allocation to these novel proteoforms?
Learning Objectives
- How to assign and visualize the genomic localization of these identified novel proteoforms?
Licence: Creative Commons Attribution 4.0 International
Keywords: Proteomics, proteogenomics
Target audience: Students
Resource type: e-learning
Version: 19
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- How to assign and visualize the genomic localization of these identified novel proteoforms?
Date modified: 2024-08-09
Date published: 2018-11-20
Contributors: James Johnson, Pratik Jagtap, Praveen Kumar, Ray Sajulga, Subina Mehta, Timothy J. Griffin
Scientific topics: Proteomics
Activity log
