e-learning
Galaxy Database schema
Abstract
For the hands-on examples you need access to a Galaxy server and access to its PostgreSQL database. You can set-up this yourself, or use the Galaxy Docker Image provided by Björn Grüning (https://github.com/bgruening/docker-galaxy-stable). During this tutorial, we will work with the Galaxy Docker Image.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- Running a production Galaxy server, you some times end up in with a situation, where you manually need to interact with the Galaxy database: how do you do that
- How to extract usage information, which can not be gathered using the given report tools
- How to move from MySQL to PostgreSQL
- Is there ever a need to manually change the contents of a table
Learning Objectives
- Learn some of the design concepts of the Galaxy database
- Extract information from the Galaxy database
- Get to know SchemaSpy
Licence: Creative Commons Attribution 4.0 International
Keywords: Galaxy Server administration
Target audience: Galaxy Administrators
Resource type: e-learning
Version: 22
Status: Active
Learning objectives:
- Learn some of the design concepts of the Galaxy database
- Extract information from the Galaxy database
- Get to know SchemaSpy
Date modified: 2023-11-09
Date published: 2016-07-20
Contributors: Björn Grüning, Hans-Rudolf Hotz
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