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Content provider
- ELIXIR Slovenia16
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- ELIXIR Norway10
- Centre for Digital Life Norway7
- Barcelona Supercomputing Center (BSC)6
- NBIS4
- ELIXIR Luxembourg3
- INB: Spanish National Bioinformatics Institute3
- Software Carpentry3
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- BioData.pt1
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- European Bioinformatics Institute (EBI)1
- Galaxy Project1
- IFB French Institute of Bioinformatics1
- NORBIS, the Norwegian national research school in bioinformatics, biostatistics and systems biology1
- UCL Engineering1
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Keyword
- DMP26
- ELIXIR-CONVERGE24
- EeLP20
- eLearning20
- CONVERGE19
- metadata15
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- FAIR13
- data publication13
- training11
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- bioinformatics6
- DMP evaluation5
- DMP templates5
- Data management planning5
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- R5
- Workshop5
- data life cycle - analyse5
- data life cycle - plan5
- data life cycle - preserve5
- data life cycle - process5
- data life cycle - share5
- genomics5
- research data management5
- template5
- tools5
- Command line4
- Data Visualization4
- Data managment plan4
- RStudio4
- Shell4
- competency4
- data FAIRness4
- data life cycle - collect4
- data life cycle - reuse4
- data organisation4
- evaluation4
- licensing4
- sensitive4
- sensitive data4
- Assembly3
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- Unix/Linux3
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- data cleaning3
- data life cycle3
- data quality3
- data stewardship3
- data visualisation3
- e-learning3
- on-line3
- ATAC-seq2
- Artificial Intelligence2
- ChIP-Seq2
- Coding2
- Data Management2
- Data analysis2
- FAIR data2
- GitHub2
- HPC2
- Healthcare2
- Open science2
- Precision Medicine2
- Programming2
- Python2
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- Software skills2
- SoftwareCarpentry2
- Statistics2
- Unix Shell2
- assembly2
- biomedical applications2
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Scientific topic
- Data management24
- Metadata management24
- Research data management (RDM)24
- FAIR data16
- Findable, accessible, interoperable, reusable data16
- Exomes13
- Genome annotation13
- Genomes13
- Genomics13
- Personal genomics13
- Synthetic genomics13
- Viral genomics13
- Whole genomes13
- Bioinformatics12
- Cloud computing11
- Computer science11
- Data archival11
- Data archiving11
- Data curation11
- Data curation and archival11
- Data preservation11
- Database curation11
- HPC11
- High performance computing11
- High-performance computing11
- Research data archiving11
- Data clean-up7
- Data cleaning7
- Data integrity7
- Data quality7
- Data quality management7
- Data governance6
- Data identity and mapping5
- Pipelines5
- Software integration5
- Tool integration5
- Tool interoperability5
- Workflows5
- Active learning3
- Biomathematics3
- Computational biology3
- Data rendering3
- Data visualisation3
- Ensembl learning3
- Kernel methods3
- Knowledge representation3
- Machine learning3
- Mathematical biology3
- Neural networks3
- Recommender system3
- Reinforcement learning3
- Supervised learning3
- Theoretical biology3
- Unsupervised learning3
- Biomedical science2
- Biomedical sciences2
- Chemical informatics2
- Cheminformatics2
- Chemoinformatics2
- Comparative transcriptomics2
- Health science2
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- Information management2
- Information science2
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- Transcriptome2
- Transcriptomics2
- Algorithms1
- Bayesian methods1
- BioNLP1
- Biological modelling1
- Biological processes1
- Biological sequences1
- Biological system modelling1
- Biomarkers1
- Biostatistics1
- Bottom-up proteomics1
- Chromosome walking1
- Clone verification1
- Comparative genomics1
- Computational chemistry1
- Computer programming1
- DNA-Seq1
- DNase-Seq1
- Data integration1
- Data integration and warehousing1
- Data structures1
- Data warehousing1
- Descriptive statistics1
- Diagnostic markers1
- Diffraction experiment1
- Discovery proteomics1
- Drug discovery1
- Evolution1
- Evolutionary biology1
- Gaussian processes1
- High throughput sequencing1
- High-throughput sequencing1
- Imaging1
- Inferential statistics1
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Operation
- Data handling20
- File handling20
- File processing20
- Processing20
- Report handling20
- Utility operation20
- Data brokering14
- Data deposition14
- Data deposition brokering14
- Data submission14
- Database deposition14
- Database submission14
- Data formatting3
- Data reformatting3
- File format conversion3
- File formatting3
- File reformatting3
- Format conversion3
- Data filtering2
- Data management planning2
- File format validation2
- Format validation2
- Sequence filtering2
- rRNA filtering2
- Annotation1
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Venue
- University of Ljubljana, Faculty of Medicine5
- Delta building, Narva mnt 18 room 2005, Tartu3
- Georg Sverdrups hus, 39 Moltke Moes vei3
- Narva mnt 18, room 20213
- Online3
- Auditorium 1019, Narva mnt 18 (UT Delta Centre)2
- Auditorium 2005 (the Linux classroom), Narva mnt 18 (UT Delta Centre)2
- Department of Informatics, 23B Gaustadalléen2
- Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí2
- Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande2
- Leuven2
- Narva mnt 18, 18 Narva maantee2
- Narva mnt 18, room 10222
- Narva mnt 18, room 20342
- Online via Zoom2
- University of Cambridge, Trinity Ln2
- Uppsala University, SciLifeLab, BMC, Husargatan 3, Uppsala2
- Akadeemia tee 231
- Barcelona Supercomputing Center (BSC)1
- Bergen1
- Branišovská 1160/31, 31, Branišovská1
- Centro Nacional de Investigaciones Oncológicas, 3, Calle de Melchor Fernández Almagro1
- Cirad, 389, Avenue Agropolis1
- Delivered online virtually, with face-to-face sessions on Teams.1
- Delta building, Narva mnt 18 room 1008, Tartu1
- Earlham Institute (EI), Colney Lane1
- Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur1
- European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Wellcome Genome Campus1
- Facultad de Medicina de la Universidad de Granada, 11, Avenida de la Investigación1
- Faculty of Law, University of Ljubljana, Poljanski nasip 21
- Faro1
- Gaustadalléen 23, 23, Gaustadalléen1
- Georg Sverdrups hus, Moltke Moes vei, Oslo, Norway1
- Haakon Sheteligs plass 7, Haakon Sheteligs plass1
- Hilton Atlanta Airport, 1031, Virginia Avenue1
- Hotel Berlin Berlin, 17, Lützowplatz1
- INESC, 9 Rua Alves Redol1
- Institutt for pedagogikk og lærerutdanning (Faculty of Humanities), Teorifagbygget-Hus 11
- La Pedrera, 92, Passeig de Gràcia1
- Luxembourg Learning Centre University of Luxembourg1
- Melbourne1
- Narva mnt 18, 18 Narva maantee ROOM 20481
- Narva mnt 18, room 20031
- Narva mnt 18, room 20051
- Narva mnt 18, room 20401
- Naturalis Biodiversity Center and Level Leiden1
- Ole-Johan Dahl's House, 23B Gaustadalléen1
- Ole-Johan Dahls hus, 23B Gaustadalléen1
- Postdoc Centre, 16, Mill Lane1
- Rikli Balance Hotel, Cankarjeva cesta 4, SI-4260 Bled, Slovenia1
- Rävala pst 10, 10 Rävala puiestee1
- SciLifeLab - Air&Fire, Tomtebodavägen 23 A1
- Skalský Court Hotel, Lísek1
- TF fløy III, 1430 Kajaveien1
- Tallinn University, 25 Narva maantee1
- UPC Campus Nord, 1 Carrer de Jordi Girona1
- University of Liverpool, Brownlow Hill1
- University of Milano Bicocca1
- University of Milano-Bicocca, Building U7, Lab 7151
- University of Tromsø1
- Vila Lanna, V Sadech 11
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City
- Tartu25
- Oslo9
- Ljubljana6
- Tallinn4
- Barcelona3
- Cambridge3
- Prague3
- Bergen2
- Leuven2
- Liverpool2
- Oeiras2
- Tromsø2
- Uppsala2
- Atlanta1
- Berlin1
- Bled1
- Bystřice nad Pernštejnem1
- Esch-sur-Alzette1
- Faro1
- Granada1
- Leiden1
- Lisboa1
- Madrid1
- Melbourne1
- Milan1
- Montferrier-sur-Lez (Montpellier area)1
- Málaga1
- Norwich1
- Stockholm1
- online1
- Ås1
- České Budějovice1
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Sponsor
- Centre for Digital Life Norway7
- ELIXIR Converge5
- ELIXIR Norway3
- ELIXIR-CONVERGE2
- BioMedData1
- CSUC1
- Digital Life Norway1
- Digital Scholarship Centre (University of Oslo)1
- ELIXIR1
- ELIXIR EXCELERATE1
- ELIXIR: The Czech Republic Node1
- EOSC-Life1
- EXCELERATE1
- Elixir Belgium1
- Euromarine1
- European Union1
- FDO Forum1
- INB/ELIXIR-ES1
- INRA1
- INTERREG V-A Italy-Slovenia 2014-2020 project TRAIN1
- ISCIII1
- NBIS - National Bioinformatics Infrastructure Sweden1
- NORBIS1
- National Research Council of Italy1
- One Nucleus1
- Repositive1
- Spanish National Bioinformatics Institute (INB/ELIXIR-ES)1
- Spanish Supercomputing Network (RES)1
- University of Bergen1
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Target audience
- Researchers
- Graduate students863
- Institutions and other external Institutions or individuals568
- Postdocs and Staff members from the University of Cambridge568
- PhD students355
- Academics293
- Industry292
- PhD288
- Everyone is welcome to attend the courses55
- please review the policies.54
- Life Science Researchers45
- Biologists35
- bioinformaticians32
- as well as other departmental training within the University of Cambridge (potentially under a different name) so participants who have attended statistics training elsewhere should check before applying.28
- This course is included as part of several DTP and MPhil programmes23
- <span style="color:#FF0000">After you have booked a place22
- if you are unable to attend any of the live sessions and would like to work in your own time22
- including for registered university students.<span style="color:#FF0000">22
- please email the Team as Attendance will be taken on all courses. A charge is applied for non-attendance22
- Beginner20
- Master students20
- life scientists17
- PhD Students16
- This is aimed at life scientists with little or no experience in machine learning and that are looking at implementing these approaches in their research.16
- post-docs16
- All postgraduates15
- It may be particularly useful for those who have attended other Facility Courses and now need to process their data on a Linux server. It will also benefit those who find themselves using their personal computers to run computationally demanding analysis/simulations and would like to learn how to adapt these to run on a HPC.15
- This course is aimed at students and researchers of any background.15
- We assume no prior knowledge of what a HPC is or how to use it.15
- mixed audience15
- PhD candidates14
- Students14
- Bioinformaticians and wet-lab biologists who can program12
- Existing R users who are not familiar with dplyr and ggplot211
- Graduate Students11
- Professors11
- Those with programming experience in other languages that want to know what R can offer them11
- Biologists, Genomicists, Computer Scientists10
- PhD candidate9
- Wet-lab researchers and bioinformaticians9
- data steward / data manager9
- Bioinformaticians8
- Post Docs8
- Undergraduate students8
- data managers8
- data stewards8
- postdoctoral researchers8
- Beginners7
- Researchers who are applying or planning to apply image analysis in their research7
- Technicians7
- The course is aimed at biologists interested in microbiology7
- This workshop is aimed at researchers interested in proteins7
- network analysis7
- Clinicians6
- Postdoctoral Fellows6
- Postdoctoral Researchers6
- Postgraduate students6
- Senior scientist/ Principal investigator6
- The course is aimed primarily at mid-career scientists – especially those whose formal education likely included statistics6
- but who have not perhaps put this into practice since.6
- protein-protein interactions and related areas6
- researchers6
- Biologists and bioinformaticians5
- Engineers5
- Life sciences5
- Masters students5
- Note that we will not cover specific topics in phylogenomics (whole-genome phylogenies) or bacterial genomics.5
- Postdoctoral researchers5
- The course is open to Graduate students5
- This course is - in abbreviated form - included as part of several DTP and MPhil programmes5
- This course is aimed at researchers with no prior experience in phylogenetic analysis who would like an introduction to the foundations of building phylogenies from relatively small sequences (viral genomes and/or targeted regions of eukaryotic genomes).5
- Trainers5
- but not essential as we will walk through a MS typical experiment and data as part of learning about the tools.5
- software developers, bioinformaticians5
- Anyone intersted in GWAS and using the H3Africa genotyping chip4
- Anyone who is using sequencing as part of their work and/or research.4
- Bioinformaticians and wet-lab biologists who can program in Perl, Python or R.4
- Biomedical researchers4
- DMP writers4
- Data Managers4
- Early Career Researcher4
- Early Career Researchers (ECRs)4
- Familiarity with mass spectrometry or proteomics in general is desirable4
- Life Scientists4
- Molecular Biologists4
- Novice users of HPC and anyone who expects to need to use HPC systems at some stage in their research4
- Pathologists4
- Post docs4
- Principal Investigators4
- Researcher in life sciences4
- Researchers who want to extract quantitative information from microscopy images4
- The course is targeted to either proteomics practitioners or data analysts/bioinformaticians that would like to learn how to use R to analyse proteomics data.4
- This course is aimed at researchers with an interest in metabolomics and its applications4
- This workshop is aimed at researchers who need to undertake sequence searching as part of their work4
- Training Designers4
- Training instructors4
- Wet-lab Researchers4
- beginner bioinformaticians4
- bioinformatics and other life scientists planning to work with next-generation sequencing data.4
- database managers4
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Language
- English4
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