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- Workshops and courses4
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- Carpentries Italia, ELIXIR-IT1
- Computational Biology Facility, University of Liverpool: https://www.liverpool.ac.uk/computational-biology-facility/1
- Karel Berka, Pavel Polishchuk1
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- Graduates, postgraduates, and PIs, without any previous command-line experience, who want to learn to use the Linux command-line in order to be able to work with large data files.3
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- This course is aimed at advanced PhD students and post-doctoral researchers who are applying or planning to apply high throughput sequencing technologies in cancer research and wish to familiarise themselves with bioinformatics tools and data analysis methodologies specific to cancer data. Familiarity with the technology and biological use cases of high throughput sequencing is required, as is some experience with R/Bioconductor (basic understanding of the R syntax and ability to manipulate R objects) and the Unix/Linux operating system.2
- This course is aimed at individuals working across life sciences who have little or no experience in bioinformatics. Applicants are expected to be at an early stage of using bioinformatics in their research with the need to develop their knowledge and skills further. No previous knowledge of programming is required for this course; group projects may give you the opportunity to learn basic programming, but participants will be supported in this by their mentors. Depending on your chosen project, an introductory programming tutorial may be given as homework prior to attending the course.2
- This course is intended for researchers who need to analyse genomic data in order to call genomic variants. Aside from a basic understanding of molecular biology, attendees must have a working knowledge of how to use the Linux BASH command line; our 1-day 'Linux for bioinformatics' course is a suitable background.2
- This workshop is aimed at new and experienced managers of bioinformatics core facilities, or other facilities that support their users to analyse and interpret large biomolecular data sets. This course will not provide a platform for teaching hands-on bioinformatics analysis.2
- Training Coordinators2
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- Academics, post-graduate students, and anyone looking to learn this essential bioinformatics skill.1
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- Anyone interested in learning about metabolomics1
- Anyone who wants to learn more about GWAS1
- Applicants must be employed within Latin America only. A relevant undergraduate-level degree in a biology or computer science / informatics degree would be helpful. You may have an MSc/PhD in biology, computer science and/or bioinformatics, or relevant experience through employment. Please note this course will be taught in English, however some trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. You may be expected to watch pre-recorded videos and complete short assignments prior to attending the workshop. This should amount to up to 5 hours of work. 1
- Beginners who have very little background in using the command line and are enthusiastic to learn more1
- Bench biologists1
- Bioinformaticians1
- Bioinformaticians and Biologists who want to learn how to manipulate, process data, and make plots using R1
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