SIB Swiss Institute of Bioinformatics

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Showing 30 materials out of 96

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Introduction to Viral Bioinformatics

• beginner
genes and genomes infectious disease medicine and health services and resources training
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
e-learning

BLAST and multiple sequence alignment (MSA) programs

• beginner
Sequence analysis Blast Multiple sequence alignment
BLAST and multiple sequence alignment (MSA) programs

• beginner
Blast E learning Multiple sequence alignment
e-learning

UNIX Fundamentals

• beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling
e-learning

Cellosaurus : A resource on cell lines

• beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
First Steps with Python in Life Sciences

• beginner
data management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group
e-learning

neXtProt : Exploring human proteins

• beginner
Proteins Proteomics Proteins (proteins) human
Version Control with Git

• beginner
programming,reproducibility,data management programming,reproducibility,data management,training
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• intermediate
Data visualisation Bioinformatics Python Data analysis
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
Cancer Variant Analysis

•• intermediate
First Steps with R in Life Sciences

• beginner
training,biostatistics,data visualisation,programming,mark ibberson group training,biostatistics,data visualisation,programming,torsten schwede & thierry sengstag group
Single-Cell Transcriptomics with R

•• intermediate
genes and genomes biochemistry biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics mauro delorenzi & frédéric schütz group
Introduction to Large Language Models for Life Scientists

• beginner
machine learning mark ibberson group training
R Basics Quiz

• beginner
Diving into deep learning - theory and applications with PyTorch

•• intermediate
ViralZone

Phylogenetics of animal viral pathogens

• beginner
Animal pathogens E learning Phylogenetics
Introduction to Bayesian Statistics with R

•• intermediate
biostatistics training
Discover ViralZone

• beginner
genes and genomes infectious disease medicine and health services and resources training alan bridge group
NGS - Quality Control, Alignment, Visualisation

• beginner
training genes and genomes next generation sequencing environmental science medicine and health
Video, E-learning

FAIR principles in practice for health data

• beginner
Computer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability
neXtProt : Exploring human proteins
ISMARA: A tool to infer genome-wide regulatory interactions
Querying SIB resources with SPARQL
SARS-CoV-2 : Studying a new virus

Showing 30 events out of 60 (also found 515 past events)

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Introduction to Viral Bioinformatics

How to use V-pipe (SARS-CoV-2 data)

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

BLAST and multiple sequence alignment (MSA) programs

BLAST and multiple sequence alignment (MSA) programs

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

ISMARA: A tool to infer genome-wide regulatory interactions

Cellosaurus : A resource on cell lines

First Steps with Python in Life Sciences

neXtProt : Exploring human proteins

Version Control with Git

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace

Cancer Variant Analysis

First Steps with R in Life Sciences

Single-Cell Transcriptomics with R

Introduction to Large Language Models for Life Scientists

R Basics Quiz

Diving into deep learning - theory and applications with PyTorch

Phylogenetics of animal viral pathogens

Introduction to Bayesian Statistics with R

Discover ViralZone

NGS - Quality Control, Alignment, Visualisation

FAIR principles in practice for health data

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

Querying SIB resources with SPARQL

SARS-CoV-2 : Studying a new virus

Data Visualisation with R

Enrichment Analysis

Reproducible and Scalable Research with Snakemake and Software Containers

ViralZone and the Revolution in 3D Virus Structure

Data Analysis and Representation in Python

First Steps with R in Life Sciences

Introduction to Machine Learning with Python

Introduction to Machine Learning with Python

Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics

Diving into deep learning - theory and applications with PyTorch

Statistics and Machine Learning for Life Sciences

Introduction to High-performance Computing (sciCORE Cluster)

First Steps with R in Life Sciences

Introduction to Statistics with R

Multiomics Data Analysis and Integration

Submitting, Finding and Downloading Raw Sequencing Data with ENA

UniProt: Focus on Plant Proteins

Enrichment Analysis

Statistics and Machine Learning for Life Sciences

Spatial Omics Data Analysis

Cancer Variant Analysis

NGS - Quality Control, Alignment, Visualisation

Introduction to Bayesian Statistics with R

Enrichment Analysis

First Steps with SQL for Data Science

Long-read Sequence Analysis

NGS - Quality Control, Alignment, Visualisation

First Steps in Parallelization with OpenMP

Docker and Singularity for Reproducible Research: Getting Started with Containers

Snakemake for Reproducible Research: Getting Started with Workflows